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No Screenshot CopyCat (Co-phylogenetic Analysis Tool) 1.00.14 Build 20090511
CopyCat (Co-phylogenetic Analysis Tool) access cophylogenetic analyses, CopyCat provides an easy and fast access to cophylogenetic analyses. It incorporates a wrapper for the software ParaFit, which conducts a statistical test for the presence of congruence between host and parasite phylogenies.CopyCat offers various features, such as the creation of customized host-parasite association data and the computation of phylogenetic host/parasite...
Price: USD $0.00;   License: Freeware   File Size: 16732 KB;
Platform: Windows

No Screenshot Phylogenetic Independence 2.0
Phylogenetic Independence test For Serial Independence made easy, help you conduct the Test For Serial Independence (TFSI) on continuously valued characters and the Runs Test on discretely valued characters. The TFSI and Runs Test are used to test the assumption of phylogenetic independence within a set of comparative data, for example, to test whether a trait is significantly associated with its phylogenetic history.
Price: USD $0.00;   License: Freeware   File Size: 375 KB;
Platform: Windows

No Screenshot Unrooted 1.0
Unrooted is a tree drawing software able to draw any binary tree expressed in the standard phylogenetic tree format (e.g., the format used by the PHYLIP package). Trees are drawn in an unrooted way, that is, using a circular shape, with labels aligned with terminal branches.Use of Unrooted:A file selection box allows to select the tree file which then is drawn on the screen. A postscript output of the drawing can be prepared (on Macintosh, the...

Price: USD $0.00;   License: Freeware   File Size: 1024 KB;
Platform: Windows

Sequence Alignment - Phylogeny - PBIL - Hovergen - Hobacgen - Hogenom - RTKdb - Phylogenetic - Homology - Homologous Genes
No Screenshot NJPlot 2.3
Create phylogenetic trees with this tool. NJplot is a tree drawing software able to draw any phylogenetic tree expressed in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP package). NJplot is especially handy for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods.Use of NJPlotAny rooting of the unrooted tree can be interactively specified using the mouse. NJplot...

Price: USD $0.00;   License: Freeware   File Size: 1024 KB;
Platform: Windows

Sequence Alignment - Phylogeny - PBIL - Hovergen - Hobacgen - Hogenom - RTKdb - Phylogenetic - Homology - Homologous Genes
No Screenshot EPoS for Mac OS 0.8.1
A modular software framework for phylogenetic analysis and visualization. Existing phylogenetic software can be split into two groups. Algorithmic packages that provide computational methods for a specific problem, and visualization tools to analyze results. Many algorithmic tools lack in usability, as they are often command line based, while visualizations often suffer from poor graphical user interfaces. EPoS fills this gap by combining a...

Price: USD $0.00;   License: Freeware   File Size: 15667 KB;
Platform: Mac, Linux , 10.4,or,later

Epos
No Screenshot Probability of Synapomorphy New
Probability of Synapomorphy was designed as an R script that implements a new method for evaluating synapomorphy on phylogenetic trees. All you have to do is install R and run the script. A method that quantifies the pattern of character state distribution over a cladogram and as such is free of any transformational model. The condition is defined for a fully synapomorphic character state as a character state shared by all of the clade's...

Price: USD $0.00;   License: Freeware  
Platform: Windows 3.x, Windows , All

Evaluate - Phylogenesis - Probability Of Synapomorphy - Synapomorphy Phylogenesis - Synapomorphy Evaluator - Evaluate Synapomorphy - Synapomorphy
No Screenshot Primrose 2.17
Primrose is a simple, Java based application designed to help you identify potentially useful oligonucleotides for use as probes or PCR primers as phylogenetic tools.

Price: USD $0.00;   License: Freeware   File Size: 11776 KB;
Platform: Windows XP, Windows, Windows Vista , Windows Vista x64,Windows 7,Windows 7 x64

Find - Analysis - View - Analyze Fasta File - Identify Oligonucleotides - Oligonucleotides Analyzer
No Screenshot jModelTest 0.1.1
Phylogenetic model averaging. jMODELTEST ijModelTest is a software to carry out statistical selection of best-fit models of nucleotide substitution. It implements five different model selection strategies: hierarchical and dynamical likelihood ratio tests (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC), and a decision theory method (DT). It also provides estimates of model selection uncertainty, parameter importances...

Price: USD $0.00;   License: Freeware   File Size: 3788 KB;
Platform: Windows

No Screenshot SplitsTree4 4.11.3
Phylogenetic networks computation made easy. SplitsTree4 is the leading software for computing unrooted phylogenetic networks from molecular sequence data. Given an alignment of sequences, a distance matrix or a set of trees, the software will compute a phylogenetic tree or network using methods such as split decomposition, neighbor-net, consensus network, super networks methods or methods for computing hybridization or simple recombination...

Price: USD $0.00;   License: Freeware   File Size: 8171 KB;
Platform: Windows

No Screenshot Dendroscope 2.7.4
Phylogenetic trees viewer. Dendroscope help you view large phylogenetic trees and networks. The software facilitates interactive browsing and editing the trees and allow one to export the result in multiple file formats in publication quality.Researchers studying phylogenetic relationships need program that is able to visualize rooted phylogenetic trees and networks efficiently, increasingly of large datasets involving hundreds of thousands of...

Price: USD $0.00;   License: Freeware   File Size: 7106 KB;
Platform: Windows

No Screenshot FigTree 1.3.1
FigTree is a graphical viewer of phylogenetic trees. It is a graphical viewer of phylogenetic trees and as a software for producing publication-ready figures.As with most of my programs, it was written for my own needs so may not be as polished and feature-complete as a commercial program. In particular it is designed to display summarized and annotated trees produced by BEAST.FigTree is designed as a graphical viewer of phylogenetic trees and...

Price: USD $0.00;   License: Freeware   File Size: 7424 KB;
Platform: Windows

Software - Evolution - Edinburgh - Phylogeny - Molecular Phylogeny - Molecular Phylogenetics - Molecular Epidemiology
No Screenshot MrEnt 2.2
Draw phylogenetic trees with the help of this program. MrEnt is a software for drawing high-quality, printable phylogenetic trees. It is a user-friendly program that recognizes Nexus tree files (like those generated by e.g. PAUP and MrBayes) and displays them in the most commonly used tree formats. Our goal was to produce a utility to create with no troubles all tree drawings for scientific publications directly from the analysis outputs,...

Price: USD $0.00;   License: Freeware   File Size: 500 KB;
Platform: Windows

No Screenshot TNT (Tree analysis using New Technology) 1.1
Phylogenetic analysis made easy. TNT (Tree analysis using New Technology) is a software for phylogenetic analysis under parsimony (with very fast tree-searching algorithms), as well as extensive tree handling and diagnosis abilities.General:1. Windows versions with GUI; all versions can be interactively driven with commands2. a simple but strong scripting language allows customization and "programming" of complex routines or...

Price: USD $0.00;   License: Freeware   File Size: 1280 KB;
Platform: Windows

No Screenshot Treefinder 1.0
Computes phylogenetic trees from molecular sequences. Treefinder computes phylogenetic trees from molecular sequences. The software infers even large trees by maximum likelihood under a variety of models of sequence evolution. It accepts both nucleotide and amino acid data and takes rate heterogeneity into account.Separate models can be assumed for user-defined data partitions, separate rates, separate edge lengths, separate character...

Price: USD $0.00;   License: Freeware   File Size: 1873 KB;
Platform: Windows

Download - Program - Politics - Science - Evolution - Dna - Sequence - Reconstruction - Protein - Maximum
No Screenshot Statistical Dispersal-Vicariance Analysis (S-DIVA) 1.9.0425 Beta
Phylogenetic trees analysis made easy. Statistical Dispersal-Vicariance Analysis (S-DIVA) is a software for inferring biogeographic histories and provide high resolution pictures of phylogenetic trees.With this program, where ancestral reconstructions are averaged over all trees and each alternative ancestral area at node is weighted by the probability. S-DIVA is easy-to-install and provides a user-friendly experience to researchers who are...

Price: USD $0.00;   License: Freeware   File Size: 415 KB;
Platform: Windows

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